The Schnakenberg system is a planar mass-action system for two chemical species (Schnakenberg 1979). A dimensionless form for
the concentrations
and
is
|
(1)
| |||
|
(2)
|
where
and primes denote derivatives of
and
with respect to time
. The opposite signs of
represent conversion of one unit of
into one of
by autocatalysis. Adding the two equations gives
. Writing
, the unique positive equilibrium
point is
. The Jacobian
at this point has determinant
and trace
, so its two eigenvalues
are purely imaginary when the trace vanishes. If
and
with
, varying
through
makes the pair of eigenvalues
cross the imaginary axis. The resulting supercritical Hopf
bifurcation produces a small attracting limit cycle
on the side where
. Adding diffusion
terms gives a spatially dependent system of partial
differential equations for the two concentrations.