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NANUQ Distance


The NANUQ distance, also called the NANUQ metric, is a quartet-based metric on the taxa of a semi-directed phylogenetic network. Its name abbreviates "Network inference Algorithm via NeighbourNet Using Quartet distance" (Allman et al. 2019).

Let N be such a network on a taxon set X, with n=|X|>=4. For a four-taxon phylogenetic tree T, define rho_(xy)(T) to be 0 when x and y form a cherry, meaning they are adjacent to the same internal vertex, and 1 otherwise. For a four-taxon restriction Q of N, let rho_(xy)(Q) be the unweighted arithmetic mean of rho_(xy)(T) over the phylogenetic trees displayed by Q. Then

 d_N(x,y)=sum_({z,w} subset= X\{x,y})2rho_(xy)(N|_(xyzw))+2n-4.

Here the sum runs over all two-element subsets {z,w} of X\{x,y}, N|_(xyzw) denotes the restriction of N to the four indicated taxa, and d_N(x,x)=0 (Holtgrefe et al. 2025).

A metric is circularly decomposable if it is a nonnegative weighted sum of the split metrics in a split system that is compatible with a circular ordering of X. Holtgrefe et al. (2025) proved that the NANUQ distance of a binary, semi-directed, outer-labeled planar, galled level-2 network with one nontrivial blob is circularly decomposable, with positive split support equal to the union of the splits of its displayed trees.

A computer-assisted project reported the same circular decomposability and exact-support conclusions for binary, semi-directed least stable ancestor (LSA) networks that are outer-labeled planar and galled, at every finite level and with any number of blobs (VibeMathed 2026). The project used an exact finite certificate, a six-label reduction, and a composition identity. OpenAI Codex developed the proofs, certificates, and partial Lean components under human direction. As of Oct. 1, 2026, the complete theorem had not been formalized in Lean or independently reviewed by a specialist.


See also

Phylogenetic Network, Phylogenetic Tree

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References

Allman, E. S.; Baños, H.; and Rhodes, J. A. "NANUQ: A Method for Inferring Species Networks from Gene Trees under the Coalescent Model." Algorithms Mol. Biol. 14, Article 24, 2019. https://doi.org/10.1186/s13015-019-0159-2.Holtgrefe, N.; Allman, E. S.; Baños, H.; van Iersel, L.; Moulton, V.; Rhodes, J. A.; and Wicke, K. "Distinguishing Phylogenetic Level-2 Networks with Quartets and Inter-Taxon Quartet Distances." Bull. Math. Biol. 87, Article 168, 2025. https://doi.org/10.1007/s11538-025-01549-4.VibeMathed. "All-Level NANUQ Circularity and Exact Displayed-Split Support." 2026. https://vibemathed.com/problem/all-level-nanuq-circularity-and-exact-displayed-split-support.

Cite this as:

Weisstein, Eric W. "NANUQ Distance." From MathWorld--A Wolfram Resource. https://mathworld.wolfram.com/NANUQDistance.html

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